Insertion junction: CLIP2.015113_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.015113
Chromosome:chromosome 14
Location:1080400
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g614450 Hypothetical protein; (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGCCGCCTCACGCCACCCCACGGGGTTCGCACCTTGATGCGTGTGTCGA
Internal bar code:AGGGGACGCCAGTTGCTGGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2510
LEAP-Seq percent confirming:70.5882
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GATCATGCATTTCCGTGCCC
Suggested primer 2:CCAAAACCCAGATGCGCAAA