Insertion junction: CLIP2.015136_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.015136
Chromosome:chromosome 9
Location:1951610
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g801010 (1 of 28) PTHR31600:SF2 - TINY MACROCYSTS PROTEIN B-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGGCGTGTGCATGTCGCGGCATGTGGATGTAGAGCAACTGAGGCTGTCT
Internal bar code:GTAAGAACAGCACGGCATCTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3646
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTGCATCCCCAAAGATCC
Suggested primer 2:GGGGGAGGTCATTGTCAAGG