Insertion junction: CLIP2.015154_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.015154
Chromosome:chromosome 13
Location:3483344
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g587500 AOF8 (1 of 2) 1.3.5.5 - 15-cis-phytoene desaturase / Plant-type phytoene desaturase; Flavin-containing amine oxidase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGAGGGAAACGGAGGTAAACGGTGGGAACGCATGGGAGACGTAGGGAA
Internal bar code:CTAGACCTTCTAAGGGAAAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:983
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:ACACAGGTGGAAGGCAGATG
Suggested primer 2:GCGGACTTCAAGTTTTGCGT