Insertion junction: CLIP2.015177_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.015177
Chromosome:chromosome 6
Location:2361303
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g268050 HTA10 Histone H2A; (1 of 30) K11251 - histone H2A (H2A) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCAGGCCGGCCTTGGCGCTGCGGCTCACGGCCTTCTTGCCAGAGGTCT
Internal bar code:CATATGGGGGTTCTATAGATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2161
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGTTGATGCGGCAAAGGT
Suggested primer 2:ACTACCCGCCGAATCGAATC