Insertion junction: CLIP2.015177_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.015177
Chromosome:chromosome 7
Location:4629163
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre07.g344500 GT90-10,GT90F10 (1 of 2) K13667 - protein glucosyltransferase (RUMI, KTELC1); GT90 family protein 10 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCAACACCGACTGGCCCCGCCCCTGGTCCTCATCCTGTATCATGAAGC
Internal bar code:TACGTGCGGACTTTAGAGCGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1221
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CCAAACCTGCTGCAAACCTC
Suggested primer 2:GAGGTACCTGTGGGTTGAGC