Insertion junction: CLIP2.015180_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.015180
Chromosome:chromosome 16
Location:7530126
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g683035 (1 of 2) IPR003593//IPR027417 - AAA+ ATPase domain // P-loop containing nucleoside triphosphate hydrolase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGGTCGTGCCTGTCAAAGTAGCGCAGCTGCGTGTGGGGACCTGCCTTG
Internal bar code:GTAGGCAATAGGCGCTCATGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2221
LEAP-Seq percent confirming:64.2857
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGCACGTTCCTTGTGTGG
Suggested primer 2:GTGCTACGCAACAAACAGCA