Insertion junction: CLIP2.015182_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.015182
Chromosome:chromosome 16
Location:3673026
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g678452 (1 of 1) PF09753 - Membrane fusion protein Use1 (Use1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAACAAGAATGAGTTCTGAGGAGTAAGTGAAAGCGAAGTGGAGTGGTGCA
Internal bar code:TGCTTTAGACTATATAAACTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2204
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTGCATGTGTCGAGACTG
Suggested primer 2:GCGAAAATGGGTGCTTCGTT