Insertion junction: CLIP2.015189_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.015189
Chromosome:chromosome 12
Location:2882511
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g502901 (1 of 3) PF08263//PF13855 - Leucine rich repeat N-terminal domain (LRRNT_2) // Leucine rich repeat (LRR_8) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCTTGCAGGTCGCCTAGGCTCAGCACCAACCCGCTCTTTGCGGGGCCTG
Internal bar code:AAGTTGGGCAGCATCTCCCTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3859
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTTGACGCCAAACCCATT
Suggested primer 2:TCAGCATTCCCCTGGTGTTC