Insertion junction: CLIP2.015191_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.015191
Chromosome:chromosome 3
Location:2639664
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g160600 (1 of 1) IPR000104//IPR000679//IPR013088 - Antifreeze protein, type I // Zinc finger, GATA-type // Zinc finger, NHR/GATA-type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACAGAAGCTTGTTGGTGCCGCGCGGCCGCCGCCACTGTAAAGTGCCGA
Internal bar code:GTCAGCACGGCTGCCGTAGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2026
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TACACTCGCATGGATCGACG
Suggested primer 2:CGCACCATGACCAAAGTGTG