Insertion junction: CLIP2.015199_4

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.015199
Chromosome:chromosome 3
Location:4552907
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g176250 ATPVD1 (1 of 1) K02146 - V-type H+-transporting ATPase subunit d (ATPeV0D, ATP6D); Vacuolar ATP synthase subunit D intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTTCCCGTCACTTTCGCCCCCGTCGCCAGGCCGATGAGAACCTGGCAA
Internal bar code:ACCTGCCTGTCGGGTTTGAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1938
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCCTATCGAGTTCTACGC
Suggested primer 2:CCCATAGACTGCTCGAACCC