Insertion junction: CLIP2.015201_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.015201
Chromosome:chromosome 13
Location:2191452
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g578100 NUP205 (1 of 1) K14310 - nuclear pore complex protein Nup205 (NUP205, NUP192); Nucleoporin 205 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAGTTGGTAGACCATCTTGGGGAAGGGGGGGGGTGCAAGGTTGAGATAT
Internal bar code:TTGGCGAAGCGTCGTAGAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:508
LEAP-Seq percent confirming:41.6667
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCAACCTCACTCCTTGAT
Suggested primer 2:CTTGAGAGACGGCCCTGAAG