Insertion junction: CLIP2.015208_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.015208
Chromosome:chromosome 17
Location:3350682
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g722900 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTTGAGCTTAAAGCTCAGGCCACCGGGCATGCCCCGCGGCCTGCCGTC
Internal bar code:TCAATTGGCTAGTATGCATTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2122
LEAP-Seq percent confirming:98.9011
LEAP-Seq n confirming:90
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:91

Suggested primers for confirmation by PCR

Suggested primer 1:TCACAGCGCCACTCGTAATT
Suggested primer 2:TCACGTAGGGGTGCATGTTC