Insertion junction: CLIP2.015208_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.015208
Chromosome:chromosome 17
Location:3350689
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g722900 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATGTTTGATGCGATGGTGCTGTGTTGTGCCGGTGGGAAAGGCGCGCTCT
Internal bar code:TCTGGAGAGTCGGGATGGTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3527
LEAP-Seq percent confirming:76.9231
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:TCACGTAGGGGTGCATGTTC
Suggested primer 2:TCACAGCGCCACTCGTAATT