Insertion junction: CLIP2.015210_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.015210
Chromosome:chromosome 3
Location:1321261
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g150400 PIGU1,PIGU,LRG5 GPI transamidase subunit PIG-U; (1 of 1) K05293 - phosphatidylinositol glycan, class U (PIGU) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTCAGGAGCGGCGTGGGCTCGAAATCGATTGGGTTCGAAATAGCACCA
Internal bar code:TCTACCCATGCATCGTAGGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1137
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:AAAACACCACCCCCGAAACT
Suggested primer 2:TGACAGTTTACAGACGGGCC