Insertion junction: CLIP2.015226_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.015226
Chromosome:chromosome 3
Location:2985770
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g163200 (1 of 1) K15683 - NF-X1-type zinc finger protein NFXL1 (NFXL1, OZFP) CDS/intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCAAGGGTGCGGGCAGTAGGGCAGCTGCCTGTGGCATGGCTTGCCGCA
Internal bar code:TCCAGTATAAGGGATATCGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:961
LEAP-Seq percent confirming:47.8261
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGAGGTTGGGGAGGAGAT
Suggested primer 2:TCTGTCCCTCTGTCCCTCTG