Insertion junction: CLIP2.015236_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.015236
Chromosome:chromosome 3
Location:8759844
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g207713 ISA3 Isoamylase, starch debranching enzyme 3; (1 of 2) 3.2.1.68 - Isoamylase / Debranching enzyme intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGTGCGTGCGTGCGTGCGTGC
Internal bar code:CTTCACTTCCTGGCCATACTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:880
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CCAACTCTTGCCAGCAAACC
Suggested primer 2:GCTGTGTGTGCATGCTTTGA