Insertion junction: CLIP2.015239_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.015239
Chromosome:chromosome 2
Location:2851665
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g094700 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTATGGAGCCTGAACAACAAAGGCCCTCATCAAAGCGCGTGTCTTTGACT
Internal bar code:TTTATTTTAACCCTCGGAACGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3404
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GCACGTGCACCATGATGATC
Suggested primer 2:GGTTCCAACCTCTGCTTCGA