Insertion junction: CLIP2.015242_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.015242
Chromosome:chromosome 6
Location:8316534
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g307250 (1 of 1) PTHR18937//PTHR18937:SF240 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCTCCTCCCACCTGCCCCGCACCGTACCGCTCACCGTGAGGCTGGCCT
Internal bar code:GTAGGTCGAATGCAAGTGCGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2117
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CATACTTGCGTCCACCAGGT
Suggested primer 2:TACGCATGCCCAACCTCATT