Insertion junction: CLIP2.015256_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.015256
Chromosome:chromosome 1
Location:5378875
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g038000 (1 of 1) K16196 - eukaryotic translation initiation factor 2-alpha kinase 4 (EIF2AK4) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGATGGATGAGGCAGGGTTGAGGCATGTGTGAGGGCGTGCAGCAAATCCC
Internal bar code:ATCGTATGCGCTGCGTCGCCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:177
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTGTGTGTGACTCGTGGC
Suggested primer 2:CAGGGACGTGTGTGATGACA