Insertion junction: CLIP2.015258_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.015258
Chromosome:chromosome 6
Location:3545664
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278122 (1 of 1) PTHR10504:SF73 - PROTEIN C05C9.1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGGGAAGGGTCGACATTGTGCATGCGAATGCGCAAGCAAAGCTGGCCG
Internal bar code:CTCGGGCGTAGGTCGTGTAACG

Confirmation - LEAP-Seq

LEAP-Seq distance:242
LEAP-Seq percent confirming:73.3333
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCGGAGTAGGAGTGAATC
Suggested primer 2:TCGTTTGAGCTGGACCTCAC