Insertion junction: CLIP2.015259_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.015259
Chromosome:chromosome 1
Location:5472697
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g038700 CLV5 Voltage-gated chloride channel; (1 of 2) K05016 - chloride channel 7 (CLCN7) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGTGCTCCCTGCCACCCCGTCGCGTGCTGCAGGTGTGTACATGTGTGT
Internal bar code:CGAAAACATTTGGAGCATTGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1111
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCACCCGGTTGAATGTGA
Suggested primer 2:TTCTACTTCCTAGCCGCCCT