Insertion junction: CLIP2.015267_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.015267
Chromosome:chromosome 6
Location:1103276
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g257600 FA1 (1 of 4) PF13516 - Leucine Rich repeat (LRR_6); Flagellar Autonomy Protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAAGCCAACGCAAATACCGCAAGTGCAGGGTTGGGGGCGCGATACGGCTC
Internal bar code:TGTCCATGTCGTCTGGGTTACA

Confirmation - LEAP-Seq

LEAP-Seq distance:2169
LEAP-Seq percent confirming:85.0
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:TCTCACATGCCCGTGTAACC
Suggested primer 2:GTGTTGGACCTGGAGGGATG