Insertion junction: CLIP2.015277_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.015277
Chromosome:chromosome 6
Location:5792218
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g289000 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGGTGTGCCTGCGTTCATACGGCAGAATGTGCGTCACTTTGCAGGTGC
Internal bar code:GCGTTGGGTACCGCATGTTGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1701
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTCTGCAATTAACTCGGC
Suggested primer 2:GCTGCTCAACCATCAAACCG