Insertion junction: CLIP2.015278_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.015278
Chromosome:chromosome 17
Location:939918
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g702850 CAV5 (1 of 5) PTHR10037//PTHR10037:SF218 - VOLTAGE-GATED CATION CHANNEL CALCIUM AND SODIUM // SUBFAMILY NOT NAMED; Voltage-gated Ca2+ channel, alpha subunit intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGGGGCGCTGGTACTTGAAGCGGGAAGAAGCAGGGACTCAGGAGGCGA
Internal bar code:ATAGTTCGCAGAATCGTCGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:185
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTTGGAATCGGCGTCATC
Suggested primer 2:CCCTGGTACACGTTGTCGAA