| Insertion cassette: | CIB2 |
| Side of cassette: | 5' |
| Strand: | + |
| Strain: | CLIP2.015281 |
| Chromosome: | chromosome 3 |
| Location: | 6404867 |
| Confidence (%): | 80 |
| Locus systematic id | Locus common name | Defline | Feature |
|---|---|---|---|
| Cre03.g800361 | (1 of 1) IPR001584//IPR001878//IPR001986//IPR012337//IPR013103//IPR025724 - Integrase, catalytic core // Zinc finger, CCHC-type // Enolpyruvate transferase domain // Ribonuclease H-like domain // Reverse transcriptase, RNA-dependent DNA polymerase // GAG-pre-integrase domain | CDS |
Insertion site details | |
| Expected flanking sequence (starting at cassette; orientation from cassette outwards): | GGCGCCACCCCTGGCACCCGAACCCCCGCCGCCGCCCTTGCCGCGCTTCT |
| Internal bar code: | GTGCTGTTTTCTTATACTATGG |
Confirmation - LEAP-Seq | |
| LEAP-Seq distance: | 3311 |
| LEAP-Seq percent confirming: | 75.0 |
| LEAP-Seq n confirming: | 12 |
| LEAP-Seq n nonconfirming: | 4 |
| LEAP-Seq n unique pos: | 16 |
Suggested primers for confirmation by PCR | |
| Suggested primer 1: | GTATACCTCGACGCCACCTG |
| Suggested primer 2: | CCCACAGCACATGACTCACT |