Insertion junction: CLIP2.015290_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.015290
Chromosome:chromosome 12
Location:2501057
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g507200 (1 of 2) IPR000104//IPR003613 - Antifreeze protein, type I // U box domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCAAGGAGGTGGAGGTGGAGGCGGCGCGGCGACGGGTCGCAAGGTGCTG
Internal bar code:GGTAGTTTTTGTTCGTTGTGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:831
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TGAATGTAACCCCCTCCCCT
Suggested primer 2:ACGTAACTTTCACGCCGAGT