Insertion junction: CLIP2.015290_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.015290
Chromosome:chromosome 12
Location:2501062
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g507200 (1 of 2) IPR000104//IPR003613 - Antifreeze protein, type I // U box domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGCCTCCACCCCCGCCTCCACCACCCAAGCCCAGAAGCCCCCACACGC
Internal bar code:GGTAGTTTTTGTTCGTTGTGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:997
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTAACTTTCACGCCGAGT
Suggested primer 2:TGAATGTAACCCCCTCCCCT