Insertion junction: CLIP2.015294_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.015294
Chromosome:chromosome 13
Location:1899433
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g575776 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCAATGCGATTGCATGGCTTCCTGCTTAGCTTAGCGCTTTTGGCAGTG
Internal bar code:GGGGGTTGAAGTGGTTGAACTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1519
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGGTGACTGATCGGTGTG
Suggested primer 2:TCTGCCCTCAACAACATCCC