Insertion junction: CLIP2.015294_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.015294
Chromosome:chromosome 13
Location:1899439
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g575776 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCATTCTTGCAACCCTCTGGCGAAGGTTAGCCTTACCTTGGAAGTCAG
Internal bar code:GGGGGTTGAAGTGGTTGAACTG

Confirmation - LEAP-Seq

LEAP-Seq distance:470
LEAP-Seq percent confirming:53.3333
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGCCCTCAACAACATCCC
Suggested primer 2:TGTGGTGACTGATCGGTGTG