Insertion junction: CLIP2.015313_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.015313
Chromosome:chromosome 4
Location:1844823
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g217950 (1 of 1) PTHR24347//PTHR24349//PTHR24349:SF84 - SERINE/THREONINE-PROTEIN KINASE // SERINE/THREONINE-PROTEIN KINASE // CALCIUM-DEPENDENT PROTEIN KINASE 13 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACATAACTGGCCTGTTAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGC
Internal bar code:TAATTTATCAAAATGGGGCATA

Confirmation - LEAP-Seq

LEAP-Seq distance:852
LEAP-Seq percent confirming:81.8182
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCTGTACCTGCTGCTGAG
Suggested primer 2:CGAAGAGTACCTAGCCGCTG