Insertion junction: CLIP2.015322_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.015322
Chromosome:chromosome 3
Location:6158000
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g190900 (1 of 5) PTHR10351:SF42 - LD40663P intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTTACCCCATGCGCTCACGTGGATGGGGTCGCGCTGGTGCACGTGCAT
Internal bar code:GGCTAGGAACGGGAAACTGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2127
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGGAACACCCAATCCCTC
Suggested primer 2:CCCAATAAATGCGCGGGAAG