Insertion junction: CLIP2.015326_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.015326
Chromosome:chromosome 3
Location:2906244
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g162701 SRH5 SNF2-related DNA/RNA helicase; (1 of 1) 3.6.4.11 - Nucleoplasmin ATPase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCGGTATGTGGCGCCTGAGCCCCGAGGCTTCTGTCAGGTGGTCGGAATG
Internal bar code:GATTTATTTCGGTGCTATATCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1413
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:AAACGTCCGCCAATCTCCTT
Suggested primer 2:CAGGAAAGGACATGCAGGGT