Insertion junction: CLIP2.015339_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.015339
Chromosome:chromosome 1
Location:3692921
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g023950 (1 of 11) PF13229 - Right handed beta helix region (Beta_helix) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGCCGAAGGCAAGGGCGCCAAAATGCGGCTGGGCGCCGGCTGCGACGC
Internal bar code:AGAGATGCACAGATAGAAGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:326
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:ATACTGGAGTTCCGAGCCCT
Suggested primer 2:TGAGACGGTTCCACAACAGG