Insertion junction: CLIP2.015340_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.015340
Chromosome:chromosome 12
Location:4566254
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g521550 (1 of 1) PF00630//PF02493 - Filamin/ABP280 repeat (Filamin) // MORN repeat (MORN) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCCAGGACCCACTCGATGCGCTGGCCCCTGTGCGGCTGTGCCTCATTA
Internal bar code:AATCGGTGTCAGGGCACGCTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:806
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CTCAGCCGTGTGGAAGTCAT
Suggested primer 2:GCGACAATGCTTATGCGAGG