Insertion junction: CLIP2.015341_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.015341
Chromosome:chromosome 13
Location:1643803
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g573650 SRS8,SRS5 Serine/arginine-rich pre-mRNA splicing factor; (1 of 89) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCCGGCCCCGGTCCCGGTCTGGGGACCGCGCGCCATCCCGACCGGCAC
Internal bar code:CGTGTGTCAACAAGGTTAACTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2479
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGTCTGTCCAAGGAGGG
Suggested primer 2:CGCAAACTCATACACAGCCG