Insertion junction: CLIP2.015342_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.015342
Chromosome:chromosome 17
Location:6643140
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g745747 (1 of 3) PTHR12136//PTHR12136:SF47 - STEROIDOGENIC ACUTE REGULATORY PROTEIN STAR // STEROIDOGENIC ACUTE REGULATORY-LIKE PROTEIN 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCATTACATATACAGGCGGGGCGGCTGGTCGTGGGAGATGGCGAGGCGC
Internal bar code:GTCAACCGAAACAAATTACAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:786
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:AGTACAGGTCAGTGTTGGCG
Suggested primer 2:ACCTGCATCATCAAGGTGGG