Insertion junction: CLIP2.015343_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.015343
Chromosome:chromosome 8
Location:2839655
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g800935 (1 of 3) IPR004859//IPR027073 - Putative 5-3 exonuclease // 5'-3' exoribonuclease intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCTCCGGGGCGGCAGGATGCACAACAGCTGCAGCAGCGGCCGCACGGG
Internal bar code:TAAAACGGAGTGCTGTGAATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1551
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GCACGTACACACACACACAC
Suggested primer 2:CTCCCTCCTCCTCGTCTTCA