Insertion junction: CLIP2.015346_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.015346
Chromosome:chromosome 6
Location:2819032
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g271900 (1 of 1) 1.1.99.37 - Methanol dehydrogenase (nicotinoprotein) / Nicotinoprotein methanol dehydrogenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACCCTTCCTTTACCTGACTACGCCCTCCCTCATGGCTACCACTATCCC
Internal bar code:AGATGGGCAGTGTGCAAGTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:183
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTTGTGAGTGGTACGTGG
Suggested primer 2:GACACCGTAAAGGCCTGACA