Insertion junction: CLIP2.015360_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.015360
Chromosome:chromosome 10
Location:5652969
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g458950 IBA57 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCCCGGCGGTGGCTGCGGCTGCGCTGTTCCTCGCCGCGGCTTACGACA
Internal bar code:GCGCGTTCGCGCTCCGCTTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:641
LEAP-Seq percent confirming:89.4737
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:AGAAGCAGTCCGAGGTGTTG
Suggested primer 2:CTGCACGAGCTAGAGGTGAG