Insertion junction: CLIP2.015366_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.015366
Chromosome:chromosome 7
Location:4586471
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00101329

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATAGCGACTGACCAACATGTCCGCGCAGCGGCACGATCGGCATCGAATC
Internal bar code:TAGGCCAGCGGCAATAAGGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3042
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGCCTCGTCCTGTAAGTT
Suggested primer 2:CTACAAACCGGCCGTCTTCT