Insertion junction: CLIP2.015371_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.015371
Chromosome:chromosome 5
Location:1412841
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g234640 (1 of 1) IPR000048//IPR011989//IPR016024 - IQ motif, EF-hand binding site // Armadillo-like helical // Armadillo-type fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCACCCTTGCACCCGTGCAGCACCCCGGCATCACAAATGCAACTGCCTTA
Internal bar code:ACTCGTTGTCGGCGGTAAAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:866
LEAP-Seq percent confirming:57.1429
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGGTGTACCTGTGGTCAG
Suggested primer 2:CAACGACTCGCTTATGCAGC