Insertion junction: CLIP2.015371_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.015371
Chromosome:chromosome 5
Location:1412842
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g234640 (1 of 1) IPR000048//IPR011989//IPR016024 - IQ motif, EF-hand binding site // Armadillo-like helical // Armadillo-type fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCTGGTGCTTGCAAGACACGATTATAGCTGGTAGTCTTCACCGCTTGT
Internal bar code:ACTCGTTGTCGGCGGTAAAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1526
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CAACGACTCGCTTATGCAGC
Suggested primer 2:GTGGGTGTACCTGTGGTCAG