Insertion junction: CLIP2.015376_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.015376
Chromosome:chromosome 4
Location:3483070
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g227850 (1 of 1) IPR004192//IPR028978 - Ubiquinol cytochrome reductase, transmembrane domain // Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTCCTTCCAGACACATGGTGTCACTGCTGCACCTGTATCACGGACAGGT
Internal bar code:GGCCTATCGATGCGTGCTAAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1397
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:ACACACACACACACACAGGT
Suggested primer 2:AGGAGGAATGCGCATATGGG