Insertion junction: CLIP2.015378_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.015378
Chromosome:chromosome 5
Location:3039276
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g231100 (1 of 1) PF00023//PF12796//PF13637 - Ankyrin repeat (Ank) // Ankyrin repeats (3 copies) (Ank_2) // Ankyrin repeats (many copies) (Ank_4) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTCCTGGTTGGTGGTGGCTGGTGCTCCCGTACATTCCGTACGTACTCGG
Internal bar code:AAACGTGTGTGCTCAGGTGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:4129
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:AGCACTTCTGCCATCCCTTC
Suggested primer 2:GTTGCCACTTGCCAGTTGAG