Insertion junction: CLIP2.015388_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.015388
Chromosome:chromosome 10
Location:2751877
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g438150 (1 of 2) IPR001841//IPR001876//IPR016024 - Zinc finger, RING-type // Zinc finger, RanBP2-type // Armadillo-type fold CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGCGGCCCGCCCCGACGCGGATGCCAATCTCCTGGTAGCAGCGCTGCA
Internal bar code:CTATCAATGGATTAGGGAATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3160
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:TGCAAGGAAGGACTCACGAC
Suggested primer 2:AGGTGCAGCTGCTACTGAAG