Insertion junction: CLIP2.015392_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.015392
Chromosome:chromosome 2
Location:3649947
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g099950 (1 of 6) 3.4.19.12//3.4.22.69 - Ubiquitinyl hydrolase 1 / Ubiquitin thiolesterase // SARS coronavirus main proteinase / Severe acute respiratory syndrome coronavirus main protease intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATCTGCACTCACCATCATCGTCCTCATCCTCATCCTCATCATCATCATC
Internal bar code:AGTTTGTTCCGCTTTAGACAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2993
LEAP-Seq percent confirming:70.0
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCAAGCACCTCGTTGTAC
Suggested primer 2:ACGAATGCGGTCAGTGTAGG