Insertion junction: CLIP2.015398_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.015398
Chromosome:chromosome 7
Location:2951252
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g332901 (1 of 80) IPR003882 - Pistil-specific extensin-like protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCATTGCTGGGGATGGGCGGGAGTGGTGGACGTGGCGGCCTTGGAGGCG
Internal bar code:TGCCGTTGATAAGACTTTACGA

Confirmation - LEAP-Seq

LEAP-Seq distance:867
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTCAATCGTGCTGAGCCT
Suggested primer 2:ACACGGCATTTTCAGCACAC