Insertion junction: CLIP2.015411_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.015411
Chromosome:chromosome 1
Location:2325141
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g013000 (1 of 1) 2.7.7.31 - DNA nucleotidylexotransferase / Terminal transferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCACGCTTATAGGTGAGAATGGATGTGGAGTCGTCGAGACTTAGGGGGA
Internal bar code:TCTCTGTATTCAGTGAGAACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1370
LEAP-Seq percent confirming:46.1538
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCTGTGGGTCTGTCATGG
Suggested primer 2:GAGGATGAGGAGGTGGAGGT