Insertion junction: CLIP2.015425_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.015425
Chromosome:chromosome 10
Location:1944482
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g431900 (1 of 78) IPR002110//IPR020683 - Ankyrin repeat // Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCGTGCACGCGCCTTGCAGCTACAAATTGAGACAAGCAAGCTGCAGTA
Internal bar code:AGTTGTTGTTTCTATCATCCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1060
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GCGAGCTGAGACCGTAGTAC
Suggested primer 2:TACCGTGCACCTAACCCAAC