Insertion junction: CLIP2.015426_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.015426
Chromosome:chromosome 9
Location:2033829
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g396650 PAT2 Phosphate acetyltransferase; (1 of 2) 2.3.1.8 - Phosphate acetyltransferase / Phosphotransacetylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTCGGTCGCGAAATGGCTGGTCGGCCGATTCTCGCATTTTGCTCCGGG
Internal bar code:TATGAGGGAGGGTTGTCGAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1231
LEAP-Seq percent confirming:47.0588
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GAAACGCCACTTGTTTCCCC
Suggested primer 2:CACCTACCTCTACCTGCCCT